Enhancing Structural Interpretation with Deep Learning: A Case Study on CNN-Based Fault Detection in Southern Mexico

Case Studies, Technical Paper

Pineda, D. A., Rada, F., & Qi, J. (2025). Enhancing Structural Interpretation with Deep Learning: A Case Study on CNN-Based Fault Detection in Southern Mexico. GSH Journal, 1(2), 10-16.

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Abstract

The study presents a deep learning workflow to improve fault interpretation in geologically complex settings. Traditional methods such as coherence and variance attributes often fail in noisy or highly deformed areas, particularly in southern Mexico, where Miocene compression, Pliocene–Pleistocene extension, and salt tectonics create overlapping fault systems. A convolutional neural network (CNN), trained on about 4,000 synthetic seismic volumes, was applied directly to amplitude data to produce fault probability and classification volumes. These were refined using image-processing techniques to compute fault dip magnitude and azimuth, which were then analyzed with a self-organizing map (SOM) to group related fault families. The CNN-based workflow generated clearer, more continuous fault images than conventional attribute methods, reducing artifacts and interpretation time. Results showed steeply dipping faults (50°–90°) with dominant orientations between N60E and N90E, and successfully distinguished compressional from extensional regimes influenced by salt tectonics. Overall, the integrated CNN and SOM approach enhanced structural accuracy, reduced interpreter bias, and offered a scalable, efficient method for complex fault analysis.

Introduction

Methodology

The team developed a five-step CNN-based workflow to automate and enhance fault detection:

    1. Pre-conditioning using Structure-Oriented Filtering (SOF3D) to preserve edges and reduce noise.

    2. CNN Fault Probability and Classification computed from seismic amplitude (no variance volume needed).

    3. Fault Enhancement and Skeletonization via directional Laplacian of Gaussian filters to sharpen fault planes and compute Fault Dip Magnitude and Dip Azimuth.

    4. SOM Classification combining Fault Dip and Azimuth volumes to isolate fault families.

    5. 3D Interpretation guided by CNN-derived attributes for final structural mapping.

  • The CNN was trained on ~4,000 synthetic 3D seismic volumes, capturing variable noise, reflector geometries, dips, and throws.

  • Processing took only a few minutes, producing fault probability, classification, dip magnitude, and azimuth volumes that could be directly visualized in 3D.

Problem Statement
  • Traditional seismic fault detection methods (e.g., coherence, variance, semblance, ant tracking) often struggle in noisy, complex structural environments.
  • These techniques require extensive calibration and are prone to interpreter bias, particularly where multiple fault types (reverse, normal, strike-slip) coexist or overlap.
  • The Southern Mexico dataset presents additional challenges due to Miocene compression, Pliocene-Pleistocene extension, and salt tectonics, which create mixed fault systems and chaotic seismic responses (Pineda, 2025).
Course of Action
  • Pre-condition seismic data using Structure-Oriented Filtering to reduce noise and preserve reflector continuity.
  • Apply a pre-trained CNN to generate fault probability, classification, dip magnitude, and azimuth volumes.
  • Refine and classify results using image processing and a Self-Organizing Map (SOM) to group fault families.
  • Integrate and interpret in 3D, validating structural trends and improving geological understanding.
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    Jan Van De MortelGeophysicist

    Jan Van De Mortel

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    Tim Gibbons

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    Agenda

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    Over 20 years exploration and development geophysical experience with extensive 2D and 3D seismic interpretation including acquisition and processing.

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    • Run fault detection analysis in a few hours, not weeks
    • Identify thin beds down to a single seismic sample
    • Overlay fault images on stratigraphic analysis

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    Senior Geoscientist and Lead Trainer

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    Sarah holds a Bachelor’s of Science degree with majors in Biology and General Science and minor in Earth Science, a Master’s of Arts in Education and Master’s of Science in Geology from Ball State University, Muncie, Indiana. Sarah is both a Certified Petroleum Geologist, and a Registered Geologist with the State of Texas. Sarah holds teaching credentials in both Indiana and Texas.

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    Dr. Tom Smith
    President & CEO

    Dr. Tom Smith received a BS and MS degree in Geology from Iowa State University. His graduate research focused on a shallow refraction investigation of the Manson astrobleme. In 1971, he joined Chevron Geophysical as a processing geophysicist but resigned in 1980 to complete his doctoral studies in 3D modeling and migration at the Seismic Acoustics Lab at the University of Houston. Upon graduation with the Ph.D. in Geophysics in 1981, he started a geophysical consulting practice and taught seminars in seismic interpretation, seismic acquisition and seismic processing. Dr. Smith founded Seismic Micro-Technology in 1984 to develop PC software to support training workshops which subsequently led to development of the KINGDOM Software Suite for integrated geoscience interpretation with world-wide success.

    The Society of Exploration Geologists (SEG) recognized Dr. Smith’s work with the SEG Enterprise Award in 2000, and in 2010, the Geophysical Society of Houston (GSH) awarded him an Honorary Membership. Iowa State University (ISU) has recognized Dr. Smith throughout his career with the Distinguished Alumnus Lecturer Award in 1996, the Citation of Merit for National and International Recognition in 2002, and the highest alumni honor in 2015, the Distinguished Alumni Award. The University of Houston College of Natural Sciences and Mathematics recognized Dr. Smith with the 2017 Distinguished Alumni Award.

    In 2009, Dr. Smith founded Geophysical Insights, where he leads a team of geophysicists, geologists and computer scientists in developing advanced technologies for fundamental geophysical problems. The company launched the Paradise® multi-attribute analysis software in 2013, which uses Machine Learning and pattern recognition to extract greater information from seismic data.

    Dr. Smith has been a member of the SEG since 1967 and is a professional member of SEG, GSH, HGS, EAGE, SIPES, AAPG, Sigma XI, SSA and AGU. Dr. Smith served as Chairman of the SEG Foundation from 2010 to 2013. On January 25, 2016, he was recognized by the Houston Geological Society (HGS) as a geophysicist who has made significant contributions to the field of geology. He currently serves on the SEG President-Elect’s Strategy and Planning Committee and the ISU Foundation Campaign Committee for Forever True, For Iowa State.

    Carrie LaudonSenior Geophysical Consultant - Geophysical Insights

    Applying Machine Learning Technologies in the Niobrara Formation, DJ Basin, to Quickly Produce an Integrated Structural and Stratigraphic Seismic Classification Volume Calibrated to Wells

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    Ivan Marroquin
    Senior Research Geophysicist

    Iván Dimitri Marroquín is a 20-year veteran of data science research, consistently publishing in peer-reviewed journals and speaking at international conference meetings. Dr. Marroquín received a Ph.D. in geophysics from McGill University, where he conducted and participated in 3D seismic research projects. These projects focused on the development of interpretation techniques based on seismic attributes and seismic trace shape information to identify significant geological features or reservoir physical properties. Examples of his research work are attribute-based modeling to predict coalbed thickness and permeability zones, combining spectral analysis with coherency imagery technique to enhance interpretation of subtle geologic features, and implementing a visual-based data mining technique on clustering to match seismic trace shape variability to changes in reservoir properties.

    Dr. Marroquín has also conducted some ground-breaking research on seismic facies classification and volume visualization. This lead to his development of a visual-based framework that determines the optimal number of seismic facies to best reveal meaningful geologic trends in the seismic data. He proposed seismic facies classification as an alternative to data integration analysis to capture geologic information in the form of seismic facies groups. He has investigated the usefulness of mobile devices to locate, isolate, and understand the spatial relationships of important geologic features in a context-rich 3D environment. In this work, he demonstrated mobile devices are capable of performing seismic volume visualization, facilitating the interpretation of imaged geologic features.  He has definitively shown that mobile devices eventually will allow the visual examination of seismic data anywhere and at any time.

    In 2016, Dr. Marroquín joined Geophysical Insights as a senior researcher, where his efforts have been focused on developing machine learning solutions for the oil and gas industry. For his first project, he developed a novel procedure for lithofacies classification that combines a neural network with automated machine methods. In parallel, he implemented a machine learning pipeline to derive cluster centers from a trained neural network. The next step in the project is to correlate lithofacies classification to the outcome of seismic facies analysis.  Other research interests include the application of diverse machine learning technologies for analyzing and discerning trends and patterns in data related to oil and gas industry.

    Dr. Jie Qi
    Research Geophysicist

    Dr. Jie Qi is a Research Geophysicist at Geophysical Insights, where he works closely with product development and geoscience consultants. His research interests include machine learning-based fault detection, seismic interpretation, pattern recognition, image processing, seismic attribute development and interpretation, and seismic facies analysis. Dr. Qi received a BS (2011) in Geoscience from the China University of Petroleum in Beijing, and an MS (2013) in Geophysics from the University of Houston. He earned a Ph.D. (2017) in Geophysics from the University of Oklahoma, Norman. His industry experience includes work as a Research Assistant (2011-2013) at the University of Houston and the University of Oklahoma (2013-2017). Dr. Qi was with Petroleum Geo-Services (PGS), Inc. in 2014 as a summer intern, where he worked on a semi-supervised seismic facies analysis. In 2017, he served as a postdoctoral Research Associate in the Attributed Assisted-Seismic Processing and Interpretation (AASPI) consortium at the University of Oklahoma from 2017 to 2020.

    Rocky R. Roden
    Senior Consulting Geophysicist

    The Relationship of Self-Organization, Geology, and Machine Learning

    Self-organization is the nonlinear formation of spatial and temporal structures, patterns or functions in complex systems (Aschwanden et al., 2018). Simple examples of self-organization include flocks of birds, schools of fish, crystal development, formation of snowflakes, and fractals. What these examples have in common is the appearance of structure or patterns without centralized control. Self-organizing systems are typically governed by power laws, such as the Gutenberg-Richter law of earthquake frequency and magnitude. In addition, the time frames of such systems display a characteristic self-similar (fractal) response, where earthquakes or avalanches for example, occur over all possible time scales (Baas, 2002).

    The existence of nonlinear dynamic systems and ordered structures in the earth are well known and have been studied for centuries and can appear as sedimentary features, layered and folded structures, stratigraphic formations, diapirs, eolian dune systems, channelized fluvial and deltaic systems, and many more (Budd, et al., 2014; Dietrich and Jacob, 2018). Each of these geologic processes and features exhibit patterns through the action of undirected local dynamics and is generally termed “self-organization” (Paola, 2014).

    Artificial intelligence and specifically neural networks exhibit and reveal self-organization characteristics. The reason for the interest in applying neural networks stems from the fact that they are universal approximators for various kinds of nonlinear dynamical systems of arbitrary complexity (Pessa, 2008). A special class of artificial neural networks is aptly named self-organizing map (SOM) (Kohonen, 1982). It has been found that SOM can identify significant organizational structure in the form of clusters from seismic attributes that relate to geologic features (Strecker and Uden, 2002; Coleou et al., 2003; de Matos, 2006; Roy et al., 2013; Roden et al., 2015; Zhao et al., 2016; Roden et al., 2017; Zhao et al., 2017; Roden and Chen, 2017; Sacrey and Roden, 2018; Leal et al, 2019; Hussein et al., 2020; Hardage et al., 2020; Manauchehri et al., 2020). As a consequence, SOM is an excellent machine learning neural network approach utilizing seismic attributes to help identify self-organization features and define natural geologic patterns not easily seen or seen at all in the data.

    Rocky R. Roden
    Senior Consulting Geophysicist

    Rocky R. Roden started his own consulting company, Rocky Ridge Resources Inc. in 2003 and works with several oil companies on technical and prospect evaluation issues. He is also a principal in the Rose and Associates DHI Risk Analysis Consortium and was Chief Consulting Geophysicist with Seismic Micro-technology. Rocky is a proven oil finder with 37 years in the industry, gaining extensive knowledge of modern geoscience technical approaches.

    Rocky holds a BS in Oceanographic Technology-Geology from Lamar University and a MS in Geological and Geophysical Oceanography from Texas A&M University. As Chief Geophysicist and Director of Applied Technology for Repsol-YPF, his role comprised of advising corporate officers, geoscientists, and managers on interpretation, strategy and technical analysis for exploration and development in offices in the U.S., Argentina, Spain, Egypt, Bolivia, Ecuador, Peru, Brazil, Venezuela, Malaysia, and Indonesia. He has been involved in the technical and economic evaluation of Gulf of Mexico lease sales, farmouts worldwide, and bid rounds in South America, Europe, and the Far East. Previous work experience includes exploration and development at Maxus Energy, Pogo Producing, Decca Survey, and Texaco. Rocky is a member of SEG, AAPG, HGS, GSH, EAGE, and SIPES; he is also a past Chairman of The Leading Edge Editorial Board.

    Bob A. Hardage

    Bob A. Hardage received a PhD in physics from Oklahoma State University. His thesis work focused on high-velocity micro-meteoroid impact on space vehicles, which required trips to Goddard Space Flight Center to do finite-difference modeling on dedicated computers. Upon completing his university studies, he worked at Phillips Petroleum Company for 23 years and was Exploration Manager for Asia and Latin America when he left Phillips. He moved to WesternAtlas and worked 3 years as Vice President of Geophysical Development and Marketing. He then established a multicomponent seismic research laboratory at the Bureau of Economic Geology and served The University of Texas at Austin as a Senior Research Scientist for 28 years. He has published books on VSP, cross-well profiling, seismic stratigraphy, and multicomponent seismic technology. He was the first person to serve 6 years on the Board of Directors of the Society of Exploration Geophysicists (SEG). His Board service was as SEG Editor (2 years), followed by 1-year terms as First VP, President Elect, President, and Past President. SEG has awarded him a Special Commendation, Life Membership, and Honorary Membership. He wrote the AAPG Explorer column on geophysics for 6 years. AAPG honored him with a Distinguished Service award for promoting geophysics among the geological community.

    Bob A. Hardage

    Investigating the Internal Fabric of VSP data with Attribute Analysis and Unsupervised Machine Learning

    Examination of vertical seismic profile (VSP) data with unsupervised machine learning technology is a rigorous way to compare the fabric of down-going, illuminating, P and S wavefields with the fabric of up-going reflections and interbed multiples created by these wavefields. This concept is introduced in this paper by applying unsupervised learning to VSP data to better understand the physics of P and S reflection seismology. The zero-offset VSP data used in this investigation were acquired in a hard-rock, fast-velocity, environment that caused the shallowest 2 or 3 geophones to be inside the near-field radiation zone of a vertical-vibrator baseplate. This study shows how to use instantaneous attributes to backtrack down-going direct-P and direct-S illuminating wavelets to the vibrator baseplate inside the near-field zone. This backtracking confirms that the points-of-origin of direct-P and direct-S are identical. The investigation then applies principal component (PCA) analysis to VSP data and shows that direct-S and direct-P wavefields that are created simultaneously at a vertical-vibrator baseplate have the same dominant principal components. A self-organizing map (SOM) approach is then taken to illustrate how unsupervised machine learning describes the fabric of down-going and up-going events embedded in vertical-geophone VSP data. These SOM results show that a small number of specific neurons build the down-going direct-P illuminating wavefield, and another small group of neurons build up-going P primary reflections and early-arriving down-going P multiples. The internal attribute fabric of these key down-going and up-going neurons are then compared to expose their similarities and differences. This initial study indicates that unsupervised machine learning, when applied to VSP data, is a powerful tool for understanding the physics of seismic reflectivity at a prospect. This research strategy of analyzing VSP data with unsupervised machine learning will now expand to horizontal-geophone VSP data.

    Tom Smith
    President and CEO, Geophysical Insights

    Machine Learning for Incomplete Geoscientists

    This presentation covers big-picture machine learning buzz words with humor and unassailable frankness. The goal of the material is for every geoscientist to gain confidence in these important concepts and how they add to our well-established practices, particularly seismic interpretation. Presentation topics include a machine learning historical perspective, what makes it different, a fish factory, Shazam, comparison of supervised and unsupervised machine learning methods with examples, tuning thickness, deep learning, hard/soft attribute spaces, multi-attribute samples, and several interpretation examples. After the presentation, you may not know how to run machine learning algorithms, but you should be able to appreciate their value and avoid some of their limitations.

    Deborah Sacrey
    Owner, Auburn Energy

    Deborah is a geologist/geophysicist with 44 years of oil and gas exploration experience in Texas, Louisiana Gulf Coast and Mid-Continent areas of the US. She received her degree in Geology from the University of Oklahoma in 1976 and immediately started working for Gulf Oil in their Oklahoma City offices.

    She started her own company, Auburn Energy, in 1990 and built her first geophysical workstation using Kingdom software in 1996. She helped SMT/IHS for 18 years in developing and testing the Kingdom Software. She specializes in 2D and 3D interpretation for clients in the US and internationally. For the past nine years she has been part of a team to study and bring the power of multi-attribute neural analysis of seismic data to the geoscience public, guided by Dr. Tom Smith, founder of SMT. She has become an expert in the use of Paradise software and has seven discoveries for clients using multi-attribute neural analysis.

    Deborah has been very active in the geological community. She is past national President of SIPES (Society of Independent Professional Earth Scientists), past President of the Division of Professional Affairs of AAPG (American Association of Petroleum Geologists), Past Treasurer of AAPG and Past President of the Houston Geological Society. She is also Past President of the Gulf Coast Association of Geological Societies and just ended a term as one of the GCAGS representatives on the AAPG Advisory Council. Deborah is also a DPA Certified Petroleum Geologist #4014 and DPA Certified Petroleum Geophysicist #2. She belongs to AAPG, SIPES, Houston Geological Society, South Texas Geological Society and the Oklahoma City Geological Society (OCGS).

    Mike Dunn
    Senior Vice President Business Development

    Michael A. Dunn is an exploration executive with extensive global experience including the Gulf of Mexico, Central America, Australia, China and North Africa. Mr. Dunn has a proven a track record of successfully executing exploration strategies built on a foundation of new and innovative technologies. Currently, Michael serves as Senior Vice President of Business Development for Geophysical Insights.

    He joined Shell in 1979 as an exploration geophysicist and party chief and held increasing levels or responsibility including Manager of Interpretation Research. In 1997, he participated in the launch of Geokinetics, which completed an IPO on the AMEX in 2007. His extensive experience with oil companies (Shell and Woodside) and the service sector (Geokinetics and Halliburton) has provided him with a unique perspective on technology and applications in oil and gas. Michael received a B.S. in Geology from Rutgers University and an M.S. in Geophysics from the University of Chicago.

    Hal GreenDirector, Marketing & Business Development - Geophysical Insights

    Hal H. Green is a marketing executive and entrepreneur in the energy industry with more than 25 years of experience in starting and managing technology companies. He holds a B.S. in Electrical Engineering from Texas A&M University and an MBA from the University of Houston. He has invested his career at the intersection of marketing and technology, with a focus on business strategy, marketing, and effective selling practices. Mr. Green has a diverse portfolio of experience in marketing technology to the hydrocarbon supply chain – from upstream exploration through downstream refining & petrochemical. Throughout his career, Mr. Green has been a proven thought-leader and entrepreneur, while supporting several tech start-ups.

    He started his career as a process engineer in the semiconductor manufacturing industry in Dallas, Texas and later launched an engineering consulting and systems integration business. Following the sale of that business in the late 80’s, he joined Setpoint in Houston, Texas where he eventually led that company’s Manufacturing Systems business. Aspen Technology acquired Setpoint in January 1996 and Mr. Green continued as Director of Business Development for the Information Management and Polymer Business Units.

    In 2004, Mr. Green founded Advertas, a full-service marketing and public relations firm serving clients in energy and technology. In 2010, Geophysical Insights retained Advertas as their marketing firm. Dr. Tom Smith, President/CEO of Geophysical Insights, soon appointed Mr. Green as Director of Marketing and Business Development for Geophysical Insights, in which capacity he still serves today.

    Hana Kabazi
    Product Manager

    Hana Kabazi joined Geophysical Insights in October of 201, and is now one of our Product Managers for Paradise. Mrs. Kabazi has over 7 years of oil and gas experience, including 5 years and Halliburton – Landmark. During her time at Landmark she held positions as a consultant to many E&P companies, technical advisor to the QA organization, and as product manager of Subsurface Mapping in DecsionSpace. Mrs. Kabazi has a B.S. in Geology from the University of Texas Austin, and an M.S. in Geology from the University of Houston.

    Dr. Carrie LaudonSenior Geophysical Consultant - Geophysical Insights

    Carolan (Carrie) Laudon holds a PhD in geophysics from the University of Minnesota and a BS in geology from the University of Wisconsin Eau Claire. She has been Senior Geophysical Consultant with Geophysical Insights since 2017 working with Paradise®, their machine learning platform. Prior roles include Vice President of Consulting Services and Microseismic Technology for Global Geophysical Services and 17 years with Schlumberger in technical, management and sales, starting in Alaska and including Aberdeen, Scotland, Houston, TX, Denver, CO and Reading, England. She spent five years early in her career with ARCO Alaska as a seismic interpreter for the Central North Slope exploration team.

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